Performance
Home
Software
Benchmark
Performance
Decoy Sets
ZLAB
Docking sites
References
Contact
Below is the evaluation of docking results from ZDOCK against Benchmark 4, corresponding to the predictions distributed in the docking decoy sets. For each prediction, we computed the interface root-mean-square-distance (RMSD) with the bound interface Ca atoms.
Spreadsheet with performance summary
Success rates (percentage of benchmark cases with a hit in the top N predictions) and hit counts (average number of hits within the top N predictions) are provided below, for ZDOCK versions 3.0.2 and 2.3 using 6 and 15 degree sampling. Additionally we've included results for scoring algorithm IRAD, which is the new version of ZRANK; it was used to re-rank the ZDOCK 3.0.2 6 degree predictions. For ZDOCK 3.0.2F and ZDOCK 3.0, success rates and hit counts are commensurate with ZDOCK 3.0.2.
