NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 3bp8_AB against 1z6r_AB
Query= 3bp8_A mol:protein length:406 Putative NAGC-like transcriptional regulator
>1z6r_A mol:protein length:406 Mlc protein
Length = 406
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/406 (99%), Positives = 404/406 (99%)
Query: 1 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLV 60
MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIV EMLEAHLV
Sbjct: 1 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLV 60
Query: 61 QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD 120
QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD
Sbjct: 61 QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD 120
Query: 121 DSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE 180
D PLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE
Sbjct: 121 DLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE 180
Query: 181 ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS 240
ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS
Sbjct: 181 ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS 240
Query: 241 SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL 300
SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL
Sbjct: 241 SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL 300
Query: 301 CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR 360
CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR
Sbjct: 301 CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR 360
Query: 361 QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG 406
QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG
Sbjct: 361 QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG 406
Query= 3bp8_B mol:protein length:406 Putative NAGC-like transcriptional regulator
>1z6r_B mol:protein length:406 Mlc protein
Length = 406
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/406 (99%), Positives = 404/406 (99%)
Query: 1 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLV 60
MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIV EMLEAHLV
Sbjct: 1 MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLV 60
Query: 61 QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD 120
QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD
Sbjct: 61 QELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKD 120
Query: 121 DSPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE 180
D PLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE
Sbjct: 121 DLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGE 180
Query: 181 ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS 240
ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS
Sbjct: 181 ALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSS 240
Query: 241 SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL 300
SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL
Sbjct: 241 SLVEIGHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL 300
Query: 301 CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR 360
CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR
Sbjct: 301 CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIR 360
Query: 361 QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG 406
QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG
Sbjct: 361 QQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG 406
Alignment: 3bp8_C against 3bp3_A
Query= 3bp8_C mol:protein length:75 PTS system glucose-specific EIICB component
>3bp3_A mol:protein length:82 Glucose-specific phosphotransferase enzyme
II
Length = 82
Score = 150 bits (380), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFG 60
MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFG
Sbjct: 6 MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFG 65
Query: 61 TKSDNLKTEMDEYIR 75
TKSDNLKTEMDEYIR
Sbjct: 66 TKSDNLKTEMDEYIR 80