Alignment: 2z0e_A against 2d1i_A

Query= 2z0e_A mol:protein length:357  Cysteine protease ATG4B
>2d1i_A mol:protein length:398  Cysteine protease APG4B
          Length = 398

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/354 (99%), Positives = 353/354 (99%)
 
Query: 4   MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA 63 
           MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
Sbjct: 6   MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA 65 

Query: 64  IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD 123
           IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
Sbjct: 66  IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD 125

Query: 124 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR 183
           SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
Sbjct: 126 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR 185
 
Query: 184 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV 243
           RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
Sbjct: 186 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV 245

Query: 244 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPATTQPAVEPTDGCFIPDESFH 303
           ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDP TTQPAVEPTDGCFIPDESFH
Sbjct: 246 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH 305

Query: 304 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ 357
           CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ
Sbjct: 306 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQ 359

Alignment: 2z0e_B against 1v49_A

Query= 2z0e_B mol:protein length:129  Microtubule-associated proteins 1A/1B light c

>1v49_A mol:protein length:120  Microtubule-associated proteins 1A/1B light
           c
          Length = 120

 Score =  244 bits (624), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/120 (98%), Positives = 120/120 (100%)
            
Query: 6   MPSEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM 65
           MPSEKTFKQRR+FEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
Sbjct: 1   MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM 60
 
Query: 66  SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 125
           SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESE+DEDGFLYMVYASQETFG   
Sbjct: 61  SELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFG 120