NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Query: 2fd6 chain H
>pdb|2FAT|H Related structures Chain H, An Anti-Urokinase Plasminogen Activator Receptor (Upar) Antibody: Crystal Structure And Binding Epitope
Length=214
Score = 368 bits (945), Expect = 5e-103, Method: Composition-based stats.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 GVKLQQSGPEVVKPGASVKISCKASGYSFTNFYIHWVKQRPGQGLEWIGWIFHGSDNTEY 60
GVKLQQSGPEVVKPGASVKISCKASGYSFTNFYIHWVKQRPGQGLEWIGWIFHGSDNTEY
Sbjct 1 GVKLQQSGPEVVKPGASVKISCKASGYSFTNFYIHWVKQRPGQGLEWIGWIFHGSDNTEY 60
Query 61 NEKFKDKATLTADTSSSTAYMQLSSLTSEDSAVYFCARWGPHWYFDVWGQGTTVTVSSAK 120
NEKFKDKATLTADTSSSTAYMQLSSLTSEDSAVYFCARWGPHWYFDVWGQGTTVTVSSAK
Sbjct 61 NEKFKDKATLTADTSSSTAYMQLSSLTSEDSAVYFCARWGPHWYFDVWGQGTTVTVSSAK 120
Query 121 TTPPSVYPLAPGNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS 180
TTPPSVYPLAPGNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS
Sbjct 121 TTPPSVYPLAPGNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSS 180
Query 181 VTVPSSTWPSETVTCNVAHPASSTKVDKKIAAA 213
VTVPSSTWPSETVTCNVAHPASSTKVDKKIAAA
Sbjct 181 VTVPSSTWPSETVTCNVAHPASSTKVDKKIAAA 213
Query: 2fd6 chain L
>pdb|2FAT|L Related structures Chain L, An Anti-Urokinase Plasminogen Activator$Antibody: Crystal Structure And Binding Epitope
Length=212
Score = 367 bits (941), Expect = 2e-102, Method: Composition-based stats.
Identities = 211/211 (100%), Positives = 211/211 (100%), Gaps = 0/211 (0%)
Query 1 DIVLTQSPDITAASLGQKVTITCSASSSVSYMHWYQQKSGTSPKPWIFEISKLASGVPAR 60
DIVLTQSPDITAASLGQKVTITCSASSSVSYMHWYQQKSGTSPKPWIFEISKLASGVPAR
Sbjct 1 DIVLTQSPDITAASLGQKVTITCSASSSVSYMHWYQQKSGTSPKPWIFEISKLASGVPAR 60
Query 61 FSGSGSGTSYSLTISSMEAEDAAIYYCQQWNYPFTFGGGTKLEIKRADAAPTVSIFPPSS 120
FSGSGSGTSYSLTISSMEAEDAAIYYCQQWNYPFTFGGGTKLEIKRADAAPTVSIFPPSS
Sbjct 61 FSGSGSGTSYSLTISSMEAEDAAIYYCQQWNYPFTFGGGTKLEIKRADAAPTVSIFPPSS 120
Query 121 EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 180
EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT
Sbjct 121 EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLT 180
Query 181 KDEYERHNSYTCEATHKTSTSPIVKSFNRNE 211
KDEYERHNSYTCEATHKTSTSPIVKSFNRNE
Sbjct 181 KDEYERHNSYTCEATHKTSTSPIVKSFNRNE 211
Query: 2fd6 chain U
>pdb|1YWH|A Related structures Chain A, Crystal Structure Of Urokinase Plasminogen Activator Receptor
Length=313
Score = 476 bits (1226), Expect = 2e-135, Method: Composition-based stats.
Identities = 274/275 (99%), Positives = 274/275 (99%), Gaps = 0/275 (0%)
Query 2 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTG 61
LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTG
Sbjct 1 LRCMQCKTNGDCRVEECALGQDLCRTTIVRLWEEGEELELVEKSCTHSEKTNRTLSYRTG 60
Query 62 LKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEE 121
LKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEE
Sbjct 61 LKITSLTEVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDMSCERGRHQSLQCRSPEE 120
Query 122 QCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGP 181
QCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGP
Sbjct 121 QCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPGCPGSNGFHNNDTFHFLKCCNTTKCNEGP 180
Query 182 ILELENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRG 241
ILELENLPQNGRQCYSCKG STHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRG
Sbjct 181 ILELENLPQNGRQCYSCKGQSTHGCSSEETFLIDCRGPMNQCLVATGTHEPKNQSYMVRG 240
Query 242 CATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD 276
CATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD
Sbjct 241 CATASMCQHAHLGDAFSMNHIDVSCCTKSGCNHPD 275