NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY. 


Alignment: 2b4j_AB against 1biz_AB

Query= 2b4j_A mol:protein length:166  Integrase (IN)

>1biz_A mol:protein length:166  HIV-1 INTEGRASE
          Length = 166
 
 Score =  341 bits (875), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 165/166 (99%), Positives = 165/166 (99%)

Query: 1   GSHMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAG 60
           GSHMHGQVD SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAG
Sbjct: 1   GSHMHGQVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAG 60
 
Query: 61  RWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVR 120
           RWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVR
Sbjct: 61  RWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVR 120
           
Query: 121 DQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQTKE 166
           DQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQTKE
Sbjct: 121 DQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQTKE 166

Query= 2b4j_B mol:protein length:166  Integrase (IN)

>1biz_B mol:protein length:166  HIV-1 INTEGRASE
          Length = 166
          
 Score =  341 bits (875), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 165/166 (99%), Positives = 165/166 (99%)
 
Query: 1   GSHMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAG 60
           GSHMHGQVD SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAG
Sbjct: 1   GSHMHGQVDSSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAG 60

Query: 61  RWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVR 120
           RWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVR
Sbjct: 61  RWPVKTVHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVIESMNKELKKIIGQVR 120

Query: 121 DQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQTKE 166
           DQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQTKE
Sbjct: 121 DQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQTKE 166

Alignment: 2b4j_C against 1z9e_A

Query= 2b4j_C mol:protein length:98  PC4 and SFRS1 interacting protein

>1z9e_A mol:protein length:127  PC4 and SFRS1 interacting protein 2
          Length = 127
 
 Score =  200 bits (509), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1  GSSMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIR 60
          GSSMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIR
Sbjct: 1  GSSMDSRLQRIHAEIKNSLKIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIR 60

Query: 61 RFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVLNK 98
          RFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVLNK
Sbjct: 61 RFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVLNK 98