NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY. 


Alignment: 2ayo_A against 2ayn_A

Query= 2ayo_A mol:protein length:404  Ubiquitin carboxyl-terminal hydrolase 14

>2ayn_A mol:protein length:404  Ubiquitin carboxyl-terminal hydrolase 14   
          Length = 404

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/404 (100%), Positives = 404/404 (100%)

Query: 1   DMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQ 60 
           DMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQ
Sbjct: 1   DMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQ 60 
 
Query: 61  YITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRV 120
           YITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRV
Sbjct: 61  YITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRV 120

Query: 121 LQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKE 180
           LQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKE
Sbjct: 121 LQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKE 180

Query: 181 NQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVR 240
           NQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVR
Sbjct: 181 NQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVR 240
           
Query: 241 FFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSD 300
           FFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSD
Sbjct: 241 FFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSD 300

Query: 301 KKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKF 360
           KKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKF
Sbjct: 301 KKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKF 360
 
Query: 361 DDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ 404
           DDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ
Sbjct: 361 DDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESEQ 404

Alignment: 2ayo_B against 2fcn_A

Query= 2ayo_B mol:protein length:76  Ubiquitin

>2fcn_A mol:protein length:76  Ubiquitin
          Length = 76
          
 Score =  149 bits (376), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/76 (97%), Positives = 75/76 (98%)

Query: 1  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
          +QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE IPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1  LQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEVIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 61 IQKESTLHLVLRLRGG 76
          IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76