Note that RanBP1 (1K5D_B) does not have a very high sequence identity to its
unbound equivalent, which happens to be RanBP2. They have very similar structures.
RanBP does not directly interact with RanGAP and is included for completeness.

NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 1K5D_A against 1RRP_A
Query= 
         (206 letters)

>1RRP_A
          Length = 204

 Score =  422 bits (1084), Expect = e-123
 Identities = 204/204 (100%), Positives = 204/204 (100%)

Query: 1   QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 60
           QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA
Sbjct: 1   QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 60

Query: 61  GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIK 120
           GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIK
Sbjct: 61  GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIK 120

Query: 121 DRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEV 180
           DRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEV
Sbjct: 121 DRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEV 180

Query: 181 VMDPALAAQYEHDLEVAQTTALPD 204
           VMDPALAAQYEHDLEVAQTTALPD
Sbjct: 181 VMDPALAAQYEHDLEVAQTTALPD 204


Alignment: 1K5D_B against 1RRP_B
Query= 
         (146 letters)

>1RRP_B
          Length = 134

 Score =  165 bits (418), Expect = 2e-46
 Identities = 86/134 (64%), Positives = 103/134 (76%), Gaps = 4/134 (2%)

Query: 6   FEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGA 64
           FEP+V LP++ E+KT EEDEEE F  RAKLFRF  E+   EWKERG G+VK+L+HK  G 
Sbjct: 2   FEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESK--EWKERGIGNVKILRHKTSGK 59

Query: 65  IRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNA 124
           IRLLMRR++ LKICANHYI+P M+L PNAGSDR++VW+   D+ADE PKPE LAIRF   
Sbjct: 60  IRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHA-LDYADELPKPEQLAIRFKTP 118

Query: 125 ENAQKFKTKFEECR 138
           E A  FK KFEE +
Sbjct: 119 EEAALFKCKFEEAQ 132


Alignment: 1K5D_C against 1YRG_B
Query= 
         (344 letters)

>1YRG_B
          Length = 343

 Score =  672 bits (1733), Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%)

Query: 1   ARFSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKD 60
           ARFSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKD
Sbjct: 1   ARFSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKD 60

Query: 61  LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH 120
           LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH
Sbjct: 61  LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKH 120

Query: 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 180
           TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK
Sbjct: 121 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 180

Query: 181 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 240
           TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK
Sbjct: 181 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 240

Query: 241 SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEK 300
           SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEK
Sbjct: 241 SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEK 300

Query: 301 MPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELDDME 343
           MPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELDDME
Sbjct: 301 MPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELDDME 343