NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY.
Alignment: 1DQJ_A against 1DQQ_C
Query= 1dqj_A mol:protein length:214 ANTI-LYSOZYME ANTIBODY HYHEL-63
(LIGHT CHAIN)
>1dqq_C mol:protein length:214 ANTI-LYSOZYME ANTIBODY HYHEL-63 (LIGHT
CHAIN)
Length = 214
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS 60
DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS
Sbjct: 1 DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS 60
Query: 61 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP 120
RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP
Sbjct: 61 RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP 120
Query: 121 SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT 180
SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT
Sbjct: 121 SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT 180
Query: 181 LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 214
LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Sbjct: 181 LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 214
Alignment: 1DQJ_B against 1DQQ_D
Query= 1dqj_B mol:protein length:210 ANTI-LYSOZYME ANTIBODY HYHEL-63
(HEAVY CHAIN)
>1dqq_D mol:protein length:210 ANTI-LYSOZYME ANTIBODY HYHEL-63 (HEAVY
CHAIN)
Length = 210
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH 60
EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH
Sbjct: 1 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH 60
Query: 61 PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS 120
PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS
Sbjct: 61 PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS 120
Query: 121 VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS 180
VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS
Sbjct: 121 VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS 180
Query: 181 VTVTSSTWPSQSITCNVAHPASSTKVDKKI 210
VTVTSSTWPSQSITCNVAHPASSTKVDKKI
Sbjct: 181 VTVTSSTWPSQSITCNVAHPASSTKVDKKI 210
Alignment: 1DAJ_C against 3LZT_
Query= 1dqj_C mol:protein length:129 LYSOZYME
>3lzt_ mol:protein length:129 LYSOZYME
Length = 129
Score = 265 bits (676), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS 60
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS
Sbjct: 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS 60
Query: 61 RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV 120
RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV
Sbjct: 61 RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV 120
Query: 121 QAWIRGCRL 129
QAWIRGCRL
Sbjct: 121 QAWIRGCRL 129