NOTE THAT IN THE ALIGNMENTS BELOW, GAPS MOST LIKELY INDICATE
RESIDUES MISSING IN THE ELECTRON DENSITY. 


Alignment: 1DQJ_A against 1DQQ_C
Query= 1dqj_A mol:protein length:214  ANTI-LYSOZYME ANTIBODY HYHEL-63
(LIGHT CHAIN)

>1dqq_C mol:protein length:214  ANTI-LYSOZYME ANTIBODY HYHEL-63 (LIGHT
           CHAIN)
          Length = 214

 Score =  442 bits (1138), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/214 (100%), Positives = 214/214 (100%)

Query: 1   DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS 60
           DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS
Sbjct: 1   DIVLTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPS 60

Query: 61  RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP 120
           RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP
Sbjct: 61  RFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPP 120

Query: 121 SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT 180
           SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT
Sbjct: 121 SSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLT 180

Query: 181 LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 214
           LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Sbjct: 181 LTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC 214


Alignment: 1DQJ_B against 1DQQ_D
Query= 1dqj_B mol:protein length:210  ANTI-LYSOZYME ANTIBODY HYHEL-63
(HEAVY CHAIN)

>1dqq_D mol:protein length:210  ANTI-LYSOZYME ANTIBODY HYHEL-63 (HEAVY
           CHAIN)
          Length = 210

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 210/210 (100%), Positives = 210/210 (100%)

Query: 1   EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH 60
           EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH
Sbjct: 1   EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSDYWSWIRKFPGNKLEYMGYISYSGSTYYH 60

Query: 61  PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS 120
           PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS
Sbjct: 61  PSLKSRISITRDTSKNQYYLQLNSVTTEDTATYYCASWGGDVWGAGTTVTVSSAKTTAPS 120

Query: 121 VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS 180
           VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS
Sbjct: 121 VYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSS 180

Query: 181 VTVTSSTWPSQSITCNVAHPASSTKVDKKI 210
           VTVTSSTWPSQSITCNVAHPASSTKVDKKI
Sbjct: 181 VTVTSSTWPSQSITCNVAHPASSTKVDKKI 210


Alignment: 1DAJ_C against 3LZT_
Query= 1dqj_C mol:protein length:129  LYSOZYME

>3lzt_ mol:protein length:129  LYSOZYME
          Length = 129

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/129 (100%), Positives = 129/129 (100%)

Query: 1   KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS 60
           KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS
Sbjct: 1   KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINS 60

Query: 61  RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV 120
           RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV
Sbjct: 61  RWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDV 120

Query: 121 QAWIRGCRL 129
           QAWIRGCRL
Sbjct: 121 QAWIRGCRL 129